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- S2.E1 ∙ Turtles in Space: Part 1 - The Fugitoid
- S2.E2 ∙ Turtles in Space: Part 2 - The Trouble with Triceratons
- S2.E3 ∙ Turtles in Space: Part 3 - The Big House
- S2.E4 ∙ Turtles in Space: Part 4 - The Arena
- S2.E5 ∙ Turtles in Space: Part 5 - Triceraton Wars
- S2.E6 ∙ Secret Origins: Part 1
- S2.E7 ∙ Secret Origins: Part 2
- S2.E8 ∙ Secret Origins: Part 3
- S2.E9 ∙ The Ultimate Ninja
- S2.E10 ∙ Reflections
- S2.E11 ∙ Modern Love - The Return of Nano
- S2.E12 ∙ What a Croc
- S2.E13 ∙ Return to the Underground
- S2.E14 ∙ City at War: Part 1
- S2.E15 ∙ City at War: Part 2
- S2.E16 ∙ City at War: Part 3
- S2.E17 ∙ Junklantis
- S2.E18 ∙ The Golden Puck
- S2.E19 ∙ Rogue in the House: Part 1
- S2.E20 ∙ Rogue in the House: Part 2
- S2.E21 ∙ April's Artifact
- S2.E22 ∙ Return of the Justice Force
- S2.E23 ∙ Big Brawl: Part 1
- S2.E24 ∙ Big Brawl: Part 2
- S2.E25 ∙ Big Brawl: Part 3
- S2.E26 ∙ Big Brawl: Part 4
