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- S2.E1 ∙ Masera Town! A New Journey
- S2.E2 ∙ Blimp Accident!?
- S2.E3 ∙ Southern Land Pokémon and the GS Ball
- S2.E4 ∙ Save Laplace!
- S2.E5 ∙ Orange League! Natsukan Gym!
- S2.E6 ∙ Mystery of the Disappearing Pokémon!
- S2.E7 ∙ The Crystal Iwark
- S2.E8 ∙ Island of Pink Pokémon
- S2.E9 ∙ Kabuto and the Fossil's Secret!
- S2.E10 ∙ Dance! Pokémon Showboat!
- S2.E11 ∙ Goodbye Koduck! Come Again Golduck?
- S2.E12 ∙ Sailing Joy! Cross the Raging Waves!
- S2.E13 ∙ Navel Gym! Snowy Mountain Battle!
- S2.E14 ∙ Big Eater Kabigon! Big Panic!
- S2.E15 ∙ Phantom Ship and Phantom Pokémon!
- S2.E16 ∙ Nyarth-sama's Island!?
- S2.E17 ∙ Strike Soldier's Pride
- S2.E18 ∙ It's the Southern Island! All Members Assemble!
- S2.E19 ∙ Kanna of the Shitenno! Ice Battle!!
- S2.E20 ∙ Nidoran's Love Story
- S2.E21 ∙ Coil-tachi of the Big Prairie!
- S2.E22 ∙ Phantom of the Sewers!?
- S2.E23 ∙ Yuzu Gym! Type Battle 3 vs 3!!
- S2.E24 ∙ Pikachu vs Nyarth!?
- S2.E25 ∙ Lizardon! I Choose You!!
- S2.E26 ∙ Firefighting Showdown! Zenigame vs Kameil
- S2.E27 ∙ Crush 'em! Kabigon!!
- S2.E28 ∙ Tag Battle! The Final Gym!!
- S2.E29 ∙ Koiking! The Secret of Evolution!!
- S2.E30 ∙ Nyoromo and Kasumi
- S2.E31 ∙ Winner's Cup! Full Battle 6 vs 6!!
- S2.E32 ∙ Final Battle! Enter Kairyu!!
- S2.E33 ∙ Goodbye Laplace!
- S2.E34 ∙ Big Explosion of Marumine!?
- S2.E35 ∙ Return to Masara Town!
- S2.E36 ∙ Satoshi vs Shigeru!!